Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944590.1_cds_XP_016487363.1_78104
CDS Infomation

[gene=LOC107807472] [db_xref=GeneID:107807472] [protein=probable pectate lyase 16] [protein_id=XP_016487363.1] [location=join(5018..5755,5977..6080,6206..6344,6382..6420)] [gbkey=CDS]
Sequence

ATGGCAAAATCAAGTTCCTTTCAACTAATTTCATGGCTTGTAATATGTTCAGTTTCTACC
ATAGTATTAGCTAGTAAATCAAGTCATGAACATGAAACTAAAGCTGTAGATGATTATCTT
CCAAGTTATTATCCTCAGCCTCACAAAAACCTCCTAAATGTCATTGATTCGTGTTGGAGA
TTGAACGACGATTGGGCGTCCAATCGCAAGGCTTTATCAGATTGTGCAATAGGGTTTGGA
AGTAATGCTATAGGAGGTAAATATGGTGACATTTACGTGGTCACTGACCCTTCTGATGAT
CCTGTAAATCCTGAACCAGGCACTCTTAGGTATGGCGTTATTCAGTCCGAGCCACTTTGG
ATCATTTTCAAAAAGGACATGGTACTTACACTTAAGAATGAACTTATGGTCAATAGTCAC
AAGACTATAGATGGCAGAGGTGCCAAAATTGAGATTTCTAATGGTCCATGCATAACATTG
GACTATGTTACAAATGTTATTATTCATGGGATTAGTATCCATGATTGTAAGCCTAGTAAA
AAAGGGATGGTTCGTAGTAGTCCTGAACATGTTGGTGAAAGATTGGGCTCTGATGGTGAT
GCCATAAGTGTGTTTGGATCGTCTAATGTTTGGATTGATCATTGTTATCTTGCTCGCGCA
ACGGATGGCCTACTCGATGTTACTCATGCTTCAACTGCAGTAACTATCTCCAACAATTAC
TTCACTGAGCATGACAAAGTTATGTTGTTGGGGCACAATGATGAATATACTGCAGACAGA
AGCATGAAAGTCACGGTAGTTTTCAACCATTTTGGCCGTGAACTAGTTCAAAGAATGCCA
AGGGTTAGATTTGGTTATGCTCATGTGGCCAATAATTATTATGATCAATGGTTAATGTAT
GCCATTGGTGGGAGTGCAGATCCAACAATATTCAGTGAGGGAAATTATTTCATTGCTCCT
GACAAAGCTTACAACAAAGAGATCAGATATATTCACTTCTTCATTCCTTTTCCAATTTGA

Peptide Sequence

PEP ID

XP_016487363.1
PEP Infomation

PREDICTED: probable pectate lyase 16 [Nicotiana tabacum]
Sequence

MAKSSSFQLISWLVICSVSTIVLASKSSHEHETKAVDDYLPSYYPQPHKNLLNVIDSCWR
LNDDWASNRKALSDCAIGFGSNAIGGKYGDIYVVTDPSDDPVNPEPGTLRYGVIQSEPLW
IIFKKDMVLTLKNELMVNSHKTIDGRGAKIEISNGPCITLDYVTNVIIHGISIHDCKPSK
KGMVRSSPEHVGERLGSDGDAISVFGSSNVWIDHCYLARATDGLLDVTHASTAVTISNNY
FTEHDKVMLLGHNDEYTADRSMKVTVVFNHFGRELVQRMPRVRFGYAHVANNYYDQWLMY
AIGGSADPTIFSEGNYFIAPDKAYNKEIRYIHFFIPFPI

Transcript Sequence

Gene sequence data has not been registered.